> For the complete documentation index, see [llms.txt](https://gut-analysis-toolbox.gitbook.io/docs/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://gut-analysis-toolbox.gitbook.io/docs/citations.md).

# Citations

Papers that cite GAT

* Mihir Pendse, Haley De Selle, Nguyen Vo, Gabriella Quinn, Chaitanya Dende, Yun Li, Cristine N Salinas, Tarun Srinivasan, Daniel C Propheter, Alexander A Crofts, Eugene Koo, Brian Hassell, Kelly A Ruhn, Prithvi Raj, Yuuki Obata, Lora V Hooper (2023) Macrophages regulate gastrointestinal motility through complement component 1q eLife 12:e78558; doi: [doi.org/10.7554/eLife.78558](https://doi.org/10.7554/eLife.78558)
* Hamilton, A.M., Blackmer-Raynolds, L., Li, Y. *et al.* Diet-microbiome interactions promote enteric nervous system resilience following spinal cord injury. *npj Biofilms Microbiomes* 10, 75 (2024). doi: [10.1038/s41522-024-00556-y](https://doi.org/10.1038/s41522-024-00556-y) 
* Barth, BB, Redington, ER, Gautam, N, Pelot, NA, Grill, WM. Calcium image analysis in the moving gut. *Neurogastroenterology & Motility*. 2023; 00:e14678. doi:[10.1111/nmo.14678](https://doi.org/10.1111/nmo.14678)
* Han, M. N., Di Natale, M. R., Lei, E., Furness, J. B., Finkelstein, D. I., Hao, M. M., Diwakarla, S., & McQuade, R. M. (2025). Assessment of gastrointestinal function and enteric nervous system changes over time in the A53T mouse model of Parkinson's disease. *Acta neuropathologica communications*, *13*(1), 58. doi: [10.1186/s40478-025-01956-7](https://doi.org/10.1186/s40478-025-01956-7)