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Gut Analysis ToolBox - Documentation
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  • Home
  • ๐Ÿš€1. Choosing the right parameters
  • ๐Ÿ”ข2. Cell counts and ganglia analysis
    • ๐Ÿ“„Batch Analysis
  • ๐Ÿ—บ๏ธ3. Spatial Analysis
  • ๐Ÿ’ป4. Analyzing the Results
  • ๐ŸŒ‹5. Segmentation options
  • ๐Ÿš…6. QuPath for analysing ENS
  • ๐Ÿงฎ7. Multiplex
    • Multiplex image alignment
    • Multiplex analysis
    • Other resources
  • ๐Ÿ”ฌ8. Calcium Imaging Analysis
    • Image alignment/registration
    • Extracting calcium traces
    • Other Resources
  • System Requirements
  • Analysis tools & workflows of interest
  • Contributing to GAT
  • Troubleshooting
    • List of major bugs fixed
  • Citing GAT
  • Citations
  • Features
  • Feedback
  • Benchmarks
    • Ganglia Models
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Last updated 3 months ago

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